miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|86117043|gb|BB928252.1|BB928252 GACCCTTTGCATCTCTTAACTCTTCTTCTTCCTCTTCATCTTCTACTTTCCCTTCTCTTATTCAAGACAAACCTGTTTTT
GCTTCCTCTTCTCCTTTCATCACTCCAATTTTGAGAGAAGAAATGGGAAAGGGTTATGAAGAAGCAATTCAAGAACTCGA
GAAATTGTTGAGGGAGAAGGCCGACTTGAAAGCCACAGCAGCTGAAAAGGTTGAACAAATAACAGCTCAACTTGGATCAG
TTACAGCTCAAGCTGCAACACCATCATCATCTGATGGTATTCCAACATCTGAAGCCTCAGAGAGGATCAAAACTGGTTTC
ATTCACTTCAAGAAAGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAGGCCAAAGCCCCCCGTATAT
GGTGTTTGCATGCTCAGACTCAAGAGTCTGCCCATCTCATGTGCTAGATTTCCAGCCAGGAGAAGCTTTTGTAGTCAGAA
ATGTTGCTAACTTGGTTCCACCATATGACCAGGCAAAATATGCTGGAACTGGAGCTGCTATTGAGTAT




Most similar to sp|P17067|CAHC_PEA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum
           sativum PE=1 SV=1
          Length = 328

 Score =  303 bits (776), Expect = 4e-82
 Identities = 154/180 (85%), Positives = 161/180 (89%)
 Frame = +3

Query: 9   ASLNXXXXXXXXTFPSLIQDKPVFASSSPFITPILREEMGKGYEEAIQELEKLLREKADL 188
           ASLN        TFPSLIQDKPVFASSSP ITP+LREEMGKGY+EAI+EL+KLLREK +L
Sbjct: 32  ASLNTSSSSSSSTFPSLIQDKPVFASSSPIITPVLREEMGKGYDEAIEELQKLLREKTEL 91

Query: 189 KATAAEKVEQITAQLGSVTAQAATPSSSDGIPTSEASERIKTGFIHFKKEKYDKNPALYG 368
           KATAAEKVEQITAQLG       T SSSDGIP SEASERIKTGF+HFKKEKYDKNPALYG
Sbjct: 92  KATAAEKVEQITAQLG-------TTSSSDGIPKSEASERIKTGFLHFKKEKYDKNPALYG 144

Query: 369 ELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEY 548
           ELAKGQSPP+MVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEY
Sbjct: 145 ELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEY 204